I want a funny and comedic manga, but has a slice of hidden darkness and gloom in it. Than...

& id prefer it to not be yaoi. im in cleansing period of the soul atm haha

http://www.mangago.me/read-manga/chichi_kogusa/ This is cute soothing n funny at times

if you mean it is yaoi I can't find any, have you already read or watch gintama? it's really good, have dirty jokes though lol

if you search shoujo, maybe "dame na watashi koi ni shite kudasai", yumemiru taiyou, and oresama-teacher
ヾ(❀╹◡╹)ﾉ~

if you want something refreshing, read yotsuba& and hinamatsuri!! i haven't caught up to the latter though but both are hilarious! yotsuba&'s one of my faves

pandora hearts, if you're in to shounen
although it miiiight be more darkness and gloom than comedic haha
it's really good though!