http://www.mangago.me/read-manga/kimi_note/ I personally love the first pair because they're so cute (≧∀≦)
http://www.mangago.me/read-manga/konya_mo_nemurenai/
http://www.mangago.me/read-manga/seven_days/
http://www.mangago.me/read-manga/walking_with_you_junko/
http://www.mangago.me/read-manga/akudama/ (has a unique storyline)
http://www.mangago.me/read-manga/rutta_to_kodama/
Hope this helps and that you enjoy reading them! (If you want more I have a bunch!) (▰˘◡˘▰)
I have a list of less known yaoi - http://www.mangago.me/home/mangalist/26620/
could anyone recommend some really obscure/lesser known yaoi that are really good or have unique storylines? i don't mind if they're long or short, thanks in advance :3