The other lists are said to restore in the second pass, the first pass finished last night so I suppose anytime now lol. We literally just have to wait. Even if the lists come back, users have noticed there's mixed manga that's not necessarily supposed to be in a specific list etc so it will take a while for things to be resorted fully. I tried to find the suggested date but I'm a bit busy rn, I think from when I read it was around 2nd Feb...? Idk you'll have to read the FAQs lol.
https://www.mangago.me/home/mangatopic/21092806/ https://www.mangago.me/home/mangatopic/21080691/
Don't remove any manga from your lists. There's not point. During the restoration progress it'll literally just restore the manga (confirmed by another user who experienced the same thing). Also, there's risks to it too, like glitches happening and interfering with all your lists etc. Just wait, that's all you need to do, it's a slow process if you want any back at all lol

I noticed that my already read have been restored, how long till the other categories are?